#NO_HEADER_PDBSCAN for: /share/apps/genapp/sassie2/results/users/zman/no_project_specified/hiv1_gag.pdb


## OVERALL SUMMARY ##

### Chain summary ###


<i>Note: protein heavy atoms only</i>

<i>Note: the integrity of terminal residues are not checked </i>

----------------------------------------------------------------------------------------------------------------------------------------------
Chain name  Possible number of missing residues      Number of missing atoms  Number of atoms not compatible with      Number of hetero-atoms 
            based on residue numbers and distance                             CHARMM force field                                              
            analysis                                                                                                                          
----------- ---------------------------------------- ------------------------ ---------------------------------------- ----------------------- 
X           0                                        0                        0                                        0                      
----------- ---------------------------------------- ------------------------ ---------------------------------------- ----------------------- 




### Number of possible disulfide bonds ###

0


### Biological unit / BIOMT information ###

Not available for no-header pdbscan


### System statistics ###

-------------------------------------------------- ---------------------------------------------------------------------------------------------------- 
Formula                                            C<sub>2080</sub>H<sub>3378</sub>O<sub>632</sub>N<sub>616</sub>S<sub>24</sub>                        

Molecular weight                                   47897 Da : 47.90 kDa                                                                                

Center of mass (x,y,z)                             (-6.79, -23.72, 8.07) Angstrom                                                                      

Coordinate range (x,y,z)                           Low: (-31.30, -93.24, -85.82), High: (19.65, 30.38, 99.53) Angstrom                                 

Radius of gyration                                 64.04 Angstrom                                                                                      
-------------------------------------------------- ---------------------------------------------------------------------------------------------------- 




### Unique residue names ###


GLY, ALA, ARG, SER, VAL, LEU, GLU, ASP, LYS, TRP, ILE, PRO, GLN, TYR, HSE, PHE, ASN, THR, CYS, MET, HSD


### Unique atom names ###


N, HT1, HT2, HT3, CA, HA1, HA2, C, O, HN, HA, CB, HB1, HB2, HB3, CG, HG1, HG2, CD, HD1, HD2, NE, HE, CZ, NH1, HH11, HH12, NH2, HH21, HH22, OG, HB, CG1, HG11, HG12, HG13, CG2, HG21, HG22, HG23, HG, CD1, HD11, HD12, HD13, CD2, HD21, HD22, HD23, OE1, OE2, OD1, OD2, CE, HE1, HE2, NZ, HZ1, HZ2, HZ3, NE1, CE2, CE3, HE3, CZ3, CZ2, CH2, HH2, HD3, NE2, HE21, HE22, CE1, OH, HH, ND1, HZ, ND2, OG1, SG, SD, OT1, OT2

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## CHAIN "X" REPORT##


### Sequence ###


<i>Note: missing internal residues represented by '*'</i>

<i>Note: protein heavy atoms only</i>

---------- ---------------------------------------------------- 
         1 `GARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLL`

        51 `ETSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEAL`

       101 `DKIEEEQNKSKKKAQQAAADTGNNSQVSQNYPIVQNLQGQMVHQAISPRT`

       151 `LNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQML`

       201 `KETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMT`

       251 `NNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFY`

       301 `KTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPAATLEEMMTACQ`

       351 `GVGGPGHKARVIAEAMSQVTNSATIMMQKGNFRNQRKTVKCFNCGKEGHI`

       401 `AKNCRAPRKKGCWKCGKEGHQMKDCTERQAN                   `
---------- ---------------------------------------------------- 





### Possible missing internal residues based on distance analysis ###


<i>Note: the two residues inside each bracket represent the residues before and after the missing residues</i>


<i>Note: protein heavy atoms only</i>


None



### Atoms missing from CHARMM force field###


<i>Note: each atom represented as ResidueName-ResidueNumber:AtomName</i>


<i>Note: protein heavy atoms only</i>


None



### Atoms not compatible with CHARMM force field ###


<i>Note: each atom is represented as ResidueName-ResidueNumber:AtomName</i>


<i>Note: protein heavy atoms only</i>


None




### Chain statistics ###

-------------------------------------------------- ---------------------------------------------------------------------------------------------------- 
Formula                                            C<sub>2080</sub>H<sub>3378</sub>O<sub>632</sub>N<sub>616</sub>S<sub>24</sub>                        

Molecular weight                                   47897 Da : 47.90 kDa                                                                                

Center of mass (x,y,z)                             (-6.79, -23.72, 8.07) Angstrom                                                                      

Coordinate range (x,y,z)                           Low: (-31.30, -93.24, -85.82), High: (19.65, 30.38, 99.53) Angstrom                                 

Radius of gyration                                 64.04 Angstrom                                                                                      

Distance between N- & C-terminals                    149.74 Angstrom                                                                                   
-------------------------------------------------- ---------------------------------------------------------------------------------------------------- 




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## HETERO-ATOM LIST ##


### CHARMM standard ###


None

### Non-CHARMM standard ###


None

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## DISULFIDE BONDS ##


<i>Note: the two residues with disulfide bond are represented as ChainName-ResidueNumber : ChainName-ResidueNumber</i>


None


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## BIOMT information ##


Not available for no-header pdbscan


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